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BMCBI
2010
190views more  BMCBI 2010»
13 years 11 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
WSC
1998
14 years 4 days ago
MPI-SIM: Using Parallel Simulation to Evaluate MPI Programs
This paper describes the design and implementation of MPI-SIM, a library for the execution driven parallel simulation of MPI programs. MPI-LITE, a portable library that supports m...
Sundeep Prakash, Rajive Bagrodia
AAAI
1997
14 years 4 days ago
Intelligent Agents for the Synthetic Battlefield: A Company of Rotary Wing Aircraft
1 We have constructed a team of intelligent agents that perform the tasks of an attack helicopter company for a synthetic battlefield environment used for running largescale milita...
Randall W. Hill Jr., Johnny Chen, Jonathan Gratch,...
BMCBI
2008
142views more  BMCBI 2008»
13 years 11 months ago
Optimal neighborhood indexing for protein similarity search
Background: Similarity inference, one of the main bioinformatics tasks, has to face an exponential growth of the biological data. A classical approach used to cope with this data ...
Pierre Peterlongo, Laurent Noé, Dominique L...
SDM
2008
SIAM
161views Data Mining» more  SDM 2008»
14 years 6 days ago
Efficient Maximum Margin Clustering via Cutting Plane Algorithm
Maximum margin clustering (MMC) is a recently proposed clustering method, which extends the theory of support vector machine to the unsupervised scenario and aims at finding the m...
Bin Zhao, Fei Wang, Changshui Zhang