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AB
2007
Springer
14 years 1 months ago
Algebraic Systems Biology: Theses and Hypotheses
What is systems biology? What can biologists gain from an attempt to algebraize the questions in systems biology? Starting with plausible biological theses, can one algebraically m...
Bud Mishra
BRAIN
2010
Springer
13 years 4 months ago
Domain-Specific Modeling as a Pragmatic Approach to Neuronal Model Descriptions
Biologically realistic modeling has been greatly facilitated by the development of neuro-simulators, and the development of simulatorindependent formats for model exchange is the s...
Ralf Ansorg, Lars Schwabe
BMCBI
2008
166views more  BMCBI 2008»
13 years 7 months ago
Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies
Background: The analysis of large-scale data sets via clustering techniques is utilized in a number of applications. Biclustering in particular has emerged as an important problem...
Peter A. DiMaggio Jr., Scott R. McAllister, Christ...
MMAS
2011
Springer
13 years 2 months ago
Scalable Bayesian Reduced-Order Models for Simulating High-Dimensional Multiscale Dynamical Systems
While existing mathematical descriptions can accurately account for phenomena at microscopic scales (e.g. molecular dynamics), these are often high-dimensional, stochastic and thei...
Phaedon-Stelios Koutsourelakis, Elias Bilionis
CIBCB
2006
IEEE
14 years 1 months ago
A Novel Graphical Model Approach to Segmenting Cell Images
— Successful biological image analysis usually requires satisfactory segmentations to identify regions of interest as an intermediate step. Here we present a novel graphical mode...
Shann-Ching Chen, Ting Zhao, Geoffrey J. Gordon, R...