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CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Using Parallel Algorithms for Searching Molecular Sequence Databases
This work presents the development of algorithms for approximate string matching using parallel methods. It intends to do the maximum of molecular sequences comparisons per unity ...
Carla Correa Tavares dos Reis, Rubem P. Mondaini
IPPS
2007
IEEE
14 years 1 months ago
Invited Paper: A Compile-time Cost Model for OpenMP
OpenMP has gained wide popularity as an API for parallel programming on shared memory and distributed shared memory platforms. It is also a promising candidate to exploit the emer...
Chunhua Liao, Barbara M. Chapman
CODES
2011
IEEE
12 years 7 months ago
DistRM: distributed resource management for on-chip many-core systems
The trend towards many-core systems comes with various issues, among them their highly dynamic and non-predictable workloads. Hence, new paradigms for managing resources of many-c...
Sebastian Kobbe, Lars Bauer, Daniel Lohmann, Wolfg...
ISCIS
2003
Springer
14 years 22 days ago
Minimizing Communication Cost in Fine-Grain Partitioning of Sparse Matrices
Abstract. We show a two-phase approach for minimizing various communication-cost metrics in fine-grain partitioning of sparse matrices for parallel processing. In the first phase...
Bora Uçar, Cevdet Aykanat
IWOMP
2007
Springer
14 years 1 months ago
Supporting OpenMP on Cell
The Cell processor is a heterogeneous multi-core processor with one Power Processing Engine (PPE) core and eight Synergistic Processing Engine (SPE) cores. Each SPE has a directly...
Kevin O'Brien, Kathryn M. O'Brien, Zehra Sura, Ton...