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BMCBI
2008
97views more  BMCBI 2008»
13 years 7 months ago
SiteSeek: Post-translational modification analysis using adaptive locality-effective kernel methods and new profiles
Background: Post-translational modifications have a substantial influence on the structure and functions of protein. Post-translational phosphorylation is one of the most common m...
Paul D. Yoo, Yung Shwen Ho, Bing Bing Zhou, Albert...
BMCBI
2006
123views more  BMCBI 2006»
13 years 7 months ago
Computational models with thermodynamic and composition features improve siRNA design
Background: Small interfering RNAs (siRNAs) have become an important tool in cell and molecular biology. Reliable design of siRNA molecules is essential for the needs of large fun...
Svetlana A. Shabalina, Alexey N. Spiridonov, Aleks...
BMCBI
2008
173views more  BMCBI 2008»
13 years 7 months ago
Improved machine learning method for analysis of gas phase chemistry of peptides
Background: Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS) o...
Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Nat...
SBACPAD
2003
IEEE
103views Hardware» more  SBACPAD 2003»
14 years 1 months ago
Performance Analysis Issues for Parallel Implementations of Propagation Algorithm
This paper presents a theoretical study to evaluate the performance of a family of parallel implementations of the propagation algorithm. The propagation algorithm is used to an i...
Leonardo Brenner, Luiz Gustavo Fernandes, Paulo Fe...
ECUMN
2007
Springer
13 years 11 months ago
Characterization of Slice-Based H.264/AVC Encoded Video Traffic
An explicit slice-based mode type selection scheme for use in H.264/AVC has recently been developed, which preserves the coding efficiency of H.264/AVC without requiring any modif...
Astrid Undheim, Yuan Lin, Peder J. Emstad