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» A Comparison of Functional and Structural Partitioning
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BMCBI
2008
101views more  BMCBI 2008»
13 years 9 months ago
Reranking candidate gene models with cross-species comparison for improved gene prediction
Background: Most gene finders score candidate gene models with state-based methods, typically HMMs, by combining local properties (coding potential, splice donor and acceptor patt...
Qian Liu, Koby Crammer, Fernando C. N. Pereira, Da...
BMCBI
2010
105views more  BMCBI 2010»
13 years 9 months ago
Comparison of PGH2 binding site in prostaglandin synthases
Background: Prostaglandin H2 (PGH2) is a common precursor for the synthesis of five different Prostanoids via specific Prostanoid Synthases. The binding of this substrate with the...
Padmapriya Paragi-Vedanthi, Mukesh Doble
ICFP
2008
ACM
14 years 8 months ago
Functional translation of a calculus of capabilities
Reasoning about imperative programs requires the ability to track aliasing and ownership properties. We present a type system that provides this ability, by using regions, capabil...
Arthur Charguéraud, François Pottier
WG
2005
Springer
14 years 2 months ago
Algebraic Operations on PQ Trees and Modular Decomposition Trees
Partitive set families are families of sets that can be quite large, but have a compact, recursive representation in the form of a tree. This tree is a common generalization of PQ...
Ross M. McConnell, Fabien de Montgolfier
ATAL
2010
Springer
13 years 10 months ago
Coalition structure generation in multi-agent systems with mixed externalities
Coalition structure generation (CSG) for multi-agent systems is a well-studied problem. A vast majority of the previous work and the state-of-the-art approaches to CSG assume a ch...
Bikramjit Banerjee, Landon Kraemer