Sciweavers

843 search results - page 30 / 169
» A Computational Model for RNA Multiple Structural Alignment.
Sort
View
NAR
2006
119views more  NAR 2006»
13 years 9 months ago
HHsenser: exhaustive transitive profile search using HMM-HMM comparison
HHsenser is the first server to offer exhaustive intermediate profile searches, which it combines with pairwise comparison of hidden Markov models. Starting from a single protein ...
Johannes Söding, Michael Remmert, Andreas Bie...
ICNSC
2008
IEEE
14 years 3 months ago
Multiple Sequence Alignment Based on Genetic Algorithms with Reserve Selection
— This paper presents an approach to the multiple sequence alignment (MSA) problem by applying genetic algorithms with a reserve selection mechanism. MSA is one of the most funda...
Yang Chen, Jinglu Hu, Kotaro Hirasawa, Songnian Yu
GCCB
2006
14 years 19 days ago
Accelerated microRNA-Precursor Detection Using the Smith-Waterman Algorithm on FPGAs
During the last few years more and more functionalities of RNA have been discovered that were previously thought of being carried out by proteins alone. One of the most striking di...
Patrick May, Gunnar W. Klau, Markus Bauer, Thomas ...
NAACL
2010
13 years 6 months ago
Unsupervised Syntactic Alignment with Inversion Transduction Grammars
Syntactic machine translation systems currently use word alignments to infer syntactic correspondences between the source and target languages. Instead, we propose an unsupervised...
Adam Pauls, Dan Klein, David Chiang, Kevin Knight
BMCBI
2005
122views more  BMCBI 2005»
13 years 8 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...