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» A Computational Model for RNA Multiple Structural Alignment.
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SLIP
2006
ACM
14 years 2 months ago
Statistical crosstalk aggressor alignment aware interconnect delay calculation
Crosstalk aggressor alignment induces significant interconnect delay variation and needs to be taken into account in a statistical timer. In this paper, we approximate crosstalk ...
Andrew B. Kahng, Bao Liu, Xu Xu
HPDC
2010
IEEE
13 years 10 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
RECOMB
2010
Springer
14 years 3 months ago
Alignment-Free Phylogenetic Reconstruction
We introduce the first polynomial-time phylogenetic reconstruction algorithm under a model of sequence evolution allowing insertions and deletions—or indels. Given appropriate ...
Constantinos Daskalakis, Sébastien Roch
ICCV
2007
IEEE
14 years 3 months ago
Non-Rigid Object Alignment with a Mismatch Template Based on Exhaustive Local Search
Non-rigid object alignment is especially challenging when only a single appearance template is available and target and template images fail to match. Two sources of discrepancy b...
Yang Wang, Simon Lucey, Jeffrey F. Cohn
CVPR
2008
IEEE
14 years 11 months ago
Parameterized Kernel Principal Component Analysis: Theory and applications to supervised and unsupervised image alignment
Parameterized Appearance Models (PAMs) (e.g. eigentracking, active appearance models, morphable models) use Principal Component Analysis (PCA) to model the shape and appearance of...
Fernando De la Torre, Minh Hoai Nguyen