The DBAli tools use a comprehensive set of structural alignments in the DBAli database to leverage the structural information deposited in the Protein Data Bank (PDB). These tools...
Background: Probabilistic models for sequence comparison (such as hidden Markov models and pair hidden Markov models for proteins and mRNAs, or their context-free grammar counterp...
Machine translation benefits from two types of decoding techniques: consensus decoding over multiple hypotheses under a single model and system combination over hypotheses from di...
John DeNero, Shankar Kumar, Ciprian Chelba, Franz ...
Abstract: We present a method for simultaneous three-dimensional (3D) structure generation and pharmacophorebased alignment using a self-organizing algorithm called Stochastic Prox...
We present a probabilistic generative model for learning semantic parsers from ambiguous supervision. Our approach learns from natural language sentences paired with world states ...