Background: Knowledge-based potentials have been widely used in the last 20 years for fold recognition, protein structure prediction from amino acid sequence, ligand binding, prot...
Yaping Feng, Andrzej Kloczkowski, Robert L. Jernig...
Scientific computing has seen an immense growth in recent years. The Message Passing Interface (MPI) has become the de-facto standard for parallel programming model for distribute...
Background: Recent advances and automation in DNA sequencing technology has created a vast amount of DNA sequence data. This increasing growth of sequence data demands better and ...
A. K. M. A. Baten, Bill C. H. Chang, Saman K. Halg...
As high-end computing systems continue to grow in scale, recent advances in multiand many-core architectures have pushed such growth toward more denser architectures, that is, mor...
Pavan Balaji, Darius Buntinas, David Goodell, Will...
HMMer is a widely-used bioinformatics software package that uses profile HMMs (Hidden Markov Models) to model the primary structure consensus of a family of protein or nucleic aci...