We present a novel, generic framework and algorithm for hierarchical collision detection, which allows an application to balance speed and quality of the collision detection. We p...
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
Steven David Prestwich, Desmond G. Higgins, Orla O...
Large repositories of source code create new challenges and opportunities for statistical machine learning. Here we first develop Sourcerer, an infrastructure for the automated c...
Erik Linstead, Paul Rigor, Sushil Krishna Bajracha...
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
The prevalent use of XML highlights the need for a generic, flexible access-control mechanism for XML documents that supports efficient and secure query access, without revealing ...