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» A Data Transformation System for Biological Data Sources
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DEXAW
2004
IEEE
167views Database» more  DEXAW 2004»
14 years 1 months ago
BioMap: Gene Family based Integration of Heterogeneous Biological Databases Using AutoMed Metadata
This paper presents an extensible architecture that can be used to support the integration of biological data sets. Biological research frequently requires this kind of synthesis....
Michael Maibaum, Galia Rimon, Christine A. Orengo,...
CAISE
2004
Springer
14 years 3 months ago
AutoMed: A BAV Data Integration System for Heterogeneous Data Sources
Abstract. This paper describes the AutoMed repository and some associated tools, which provide the first implementation of the both as view (BAV) approach to data integration. Apa...
Michael Boyd, Sasivimol Kittivoravitkul, Charalamb...
ICDE
2003
IEEE
101views Database» more  ICDE 2003»
14 years 11 months ago
XomatiQ: Living With Genomes, Proteomes, Relations and a Little Bit of XML
In this paper, we describe a system called XomatiQ to address the problem of integration, querying and correlation of biological data. XomatiQ is an integral part of the genomics ...
Sourav S. Bhowmick, Pedro Cruz, Amey V. Laud
CIKM
1994
Springer
14 years 2 months ago
Facilitating Transformations in a Human Genome Project Database
Human Genome Project databases present a confluence of interesting database challenges: rapid schema and data evolution, complex data entry and constraint management, and the need...
Susan B. Davidson, Anthony Kosky, Barbara A. Eckma...
DASFAA
2007
IEEE
183views Database» more  DASFAA 2007»
14 years 4 months ago
BioDIFF: An Effective Fast Change Detection Algorithm for Biological Annotations
Abstract. Warehousing heterogeneous, dynamic biological data is a key technique for biological data integration as it greatly improves performance. However, it requires complex mai...
Yang Song, Sourav S. Bhowmick, C. Forbes Dewey