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» A Database Platform for Bioinformatics
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SIGMOD
2011
ACM
210views Database» more  SIGMOD 2011»
12 years 12 months ago
A platform for scalable one-pass analytics using MapReduce
Today’s one-pass analytics applications tend to be data-intensive in nature and require the ability to process high volumes of data efficiently. MapReduce is a popular programm...
Boduo Li, Edward Mazur, Yanlei Diao, Andrew McGreg...
DBSEC
2007
104views Database» more  DBSEC 2007»
13 years 10 months ago
New Paradigm of Inference Control with Trusted Computing
Abstract. The database server is a crucial bottleneck in traditional inference control architecture, as it enforces highly computation-intensive auditing for all users who query th...
Yanjiang Yang, Yingjiu Li, Robert H. Deng
P2PKM
2004
13 years 10 months ago
Coordinating Mobile Databases
Abstract. We are interested in the development of a database management layer which is completely portable and, therefore, "pluggable" on top of multiple host platforms. ...
Fausto Giunchiglia, Ilya Zaihrayeu
IPPS
2007
IEEE
14 years 3 months ago
High Performance Database Searching with HMMer on FPGAs
1 Profile Hidden Markov Models (profile HMMs) are used as a popular bioinformatics tool for sensitive database searching, e.g. a set of not annotated protein sequences is compared...
Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt
WAIM
2010
Springer
13 years 7 months ago
HyperGraphDB: A Generalized Graph Database
We present HyperGraphDB, a novel graph database based on generalized hypergraphs where hyperedges can contain other hyperedges. This generalization automatically reifies every ent...
Borislav Iordanov