In this paper, we propose a Distance-based Sequence Indexing Method (DSIM) for indexing and searching genome databases. Borrowing the idea of video compression, we compress the ge...
The ability to perform genome-wide and cross-genome data analyses can dramatically reduce the time required for new biological discoveries. This raises important issues in bioinfor...
Ruey-Lung Hsiao, Douglas Stott Parker Jr., Hung-ch...
Abstract-- Workflow systems have become increasingly popular for managing experiments where many bioinformatics tasks are chained together. Due to the large amount of data generate...
Olivier Biton, Sarah Cohen Boulakia, Susan B. Davi...
There is an emergence of cloud application platforms such as Microsoft’s Azure, Google’s App Engine and Amazon’s EC2/SimpleDB/S3. Startups and Enterprise alike, lured by the...
Background: Recent studies have shown that copy number variations (CNVs) are frequent in higher eukaryotes and associated with a substantial portion of inherited and acquired risk...
Xiaowu Gai, Juan C. Perin, Kevin Murphy, Ryan O'Ha...