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BMCBI
2008
111views more  BMCBI 2008»
13 years 8 months ago
Probabilistic base calling of Solexa sequencing data
Background: Solexa/Illumina short-read ultra-high throughput DNA sequencing technology produces millions of short tags (up to 36 bases) by parallel sequencing-by-synthesis of DNA ...
Jacques Rougemont, Arnaud Amzallag, Christian Isel...
CLUSTER
2003
IEEE
14 years 1 months ago
Improving the Performance of MPI Derived Datatypes by Optimizing Memory-Access Cost
The MPI Standard supports derived datatypes, which allow users to describe noncontiguous memory layout and communicate noncontiguous data with a single communication function. Thi...
Surendra Byna, William D. Gropp, Xian-He Sun, Raje...
ISMB
1994
13 years 9 months ago
Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Hiroshi Mamitsuka, Naoki Abe
IPPS
2002
IEEE
14 years 1 months ago
Improving Performance of Multiple Sequence Alignment Analysis in Multi-Client Environments
This paper is concerned with the efficient execution of multiplesequence alignmentmethodsin a multipleclientenvironment. Multiple sequence alignment (MSA) is a computationally ex...
Ümit V. Çatalyürek, Eric Stahlber...
CCGRID
2007
IEEE
14 years 2 months ago
Study of Different Replica Placement and Maintenance Strategies in Data Grid
Data replication is an excellent technique to move and cache data close to users. By replication, data access performance can be improved dramatically. One of the challenges in da...
Rashedur M. Rahman, Ken Barker, Reda Alhajj