Background: In recent years, the demand for computational power in computational biology has increased due to rapidly growing data sets from microarray and other high-throughput t...
We had introduced the massively parallel global cellular automata (GCA) model. Parallel algorithms derived from applications can be mapped straight forward onto this model. In thi...
We present a general Multi-Agent System framework for distributed data mining based on a Peer-toPeer model. The framework adopts message-based asynchronous communication and a dyn...
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
Analysis of massive graphs has emerged as an important area for massively parallel computation. In this paper, it is shown how the Fresh Breeze trees-of-chunks memory model may be...