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» A Fast Heuristic Algorithm for a Probe Mapping Problem
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EVOW
2006
Springer
13 years 11 months ago
Fast EAX Algorithm Considering Population Diversity for Traveling Salesman Problems
This paper proposes an evolutionary algorithm (EA) that is applied to the traveling salesman problem (TSP). Existing approximation methods to address the TSP known to be state-of-t...
Yuichi Nagata
IFIP
2004
Springer
14 years 25 days ago
Imperfectness of Data for STS-Based Physical Mapping
In the STS-based mapping, we are requested to obtain the correct order of probes in a DNA sequence from a given set of fragments or equivalently a hybridization matrix A. It is wel...
Hiro Ito, Kazuo Iwama, Takeyuki Tamura
EDBT
2010
ACM
116views Database» more  EDBT 2010»
14 years 2 months ago
HARRA: fast iterative hashed record linkage for large-scale data collections
We study the performance issue of the “iterative” record linkage (RL) problem, where match and merge operations may occur together in iterations until convergence emerges. We ...
Hung-sik Kim, Dongwon Lee
RECOMB
2000
Springer
13 years 11 months ago
Contig selection in physical mapping
In physical mapping, one orders a set of genetic landmarks or a library of cloned fragments of DNA according to their position in the genome. Our approach to physical mapping divi...
Steffen Heber, Jens Stoye, Jörg D. Hoheisel, ...
TCBB
2011
13 years 2 months ago
Accurate Construction of Consensus Genetic Maps via Integer Linear Programming
—We study the problem of merging genetic maps, when the individual genetic maps are given as directed acyclic graphs. The computational problem is to build a consensus map, which...
Yonghui Wu, Timothy J. Close, Stefano Lonardi