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    BMCBI
    2008
    126views more  BMCBI 2008»
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    13 years 8 months ago
    c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
    Download  www.biomedcentral.com
    Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
    Katerina Kechris, Hao Li
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    BIBE
    2005
    IEEE
    115views Bioinformatics» more  BIBE 2005»
    GOMIT: A Generic and Adaptive Annotation Algorithm Based on Gene Ontology Term Distributions
    14 years 2 months ago
    GOMIT: A Generic and Adaptive Annotation Algorithm Based on Gene Ontology Term Distributions
    Download  rendylu.iis.sinica.edu.tw
    We address the issue of providing highly informative annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a set of candidate ...
    In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen
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    BIBE
    2001
    IEEE
    193views Bioinformatics» more  BIBE 2001»
    GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data
    14 years 8 days ago
    GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data
    Download  www.cs.man.ac.uk
    Effective analysis of genome sequences and associated functional data requires access to many different kinds of biological information. For example, when analysing gene expressio...
    Mike Cornell, Norman W. Paton, Shengli Wu, Carole ...
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    BMCBI
    2008
    179views more  BMCBI 2008»
    Building pathway clusters from Random Forests classification using class votes
    13 years 8 months ago
    Building pathway clusters from Random Forests classification using class votes
    Download  www.biomedcentral.com
    Background: Recent years have seen the development of various pathway-based methods for the analysis of microarray gene expression data. These approaches have the potential to bri...
    Herbert Pang, Hongyu Zhao
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    BIBE
    2006
    IEEE
    184views Bioinformatics» more  BIBE 2006»
    A Language Modeling Text Mining Approach to the Annotation of Protein Community
    14 years 2 months ago
    A Language Modeling Text Mining Approach to the Annotation of Protein Community
    Download  www.pages.drexel.edu
    This paper discusses an ontology based language modeling text mining approach to the annotation of protein community. Communities appear to play an important role in the functional...
    Xiaodan Zhang, Daniel Duanqing Wu, Xiaohua Zhou, X...
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