Background: We recently developed the Paired End diTag (PET) strategy for efficient characterization of mammalian transcriptomes and genomes. The paired end nature of short PET se...
Kuo Ping Chiu, Chee-Hong Wong, Qiongyu Chen, Prami...
When aligning biological sequences, the choice of parameter values for the alignment scoring function is critical. Small changes in gap penalties, for example, can yield radically ...
Data clustering methods have many applications in the area of data mining. Traditional clustering algorithms deal with quantitative or categorical data points. However, there exist...
Tadeusz Morzy, Marek Wojciechowski, Maciej Zakrzew...
This paper proposes a hybrid genetic algorithm for multiple sequence alignment. The algorithm evolves guide sequences and aligns input sequences based on the guide sequences. It a...
Abstract. We investigate the complexity of merging sequences of small integers on the EREW PRAM. Our most surprising result is that two sorted sequences of n bits each can be merge...