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» A Generalization of Automatic Sequences
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BMCBI
2010
214views more  BMCBI 2010»
13 years 10 months ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper
BMCBI
2006
126views more  BMCBI 2006»
13 years 10 months ago
A Regression-based K nearest neighbor algorithm for gene function prediction from heterogeneous data
Background: As a variety of functional genomic and proteomic techniques become available, there is an increasing need for functional analysis methodologies that integrate heteroge...
Zizhen Yao, Walter L. Ruzzo
CP
2007
Springer
14 years 4 months ago
Encodings of the Sequence Constraint
Abstract. The SEQUENCE constraint is useful in modelling car sequencing, rostering, scheduling and related problems. We introduce half a dozen new encodings of the SEQUENCE constra...
Sebastian Brand, Nina Narodytska, Claude-Guy Quimp...
CORR
2006
Springer
94views Education» more  CORR 2006»
13 years 10 months ago
Computing spectral sequences
John McCleary insisted in his interesting textbook entitled "User's guide to spectral sequences" on the fact that the tool "spectral sequence" is not in t...
Ana Romero, Julio Rubio, Francis Sergeraert
CSL
2007
Springer
14 years 2 months ago
Logical Refinements of Church's Problem
Abstract. Church's Problem (1962) asks for the construction of a procedure which, given a logical specification on sequence pairs, realizes for any input sequence X an output...
Alexander Rabinovich, Wolfgang Thomas