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» A Generalization of Automatic Sequences
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ICML
2008
IEEE
14 years 11 months ago
Sequence kernels for predicting protein essentiality
The problem of identifying the minimal gene set required to sustain life is of crucial importance in understanding cellular mechanisms and designing therapeutic drugs. This work d...
Cyril Allauzen, Mehryar Mohri, Ameet Talwalkar
EUROSSC
2007
Springer
14 years 4 months ago
Recognition of User Activity Sequences Using Distributed Event Detection
We describe and evaluate a distributed architecture for the online recognition of user activity sequences. In a lower layer, simple heterogeneous atomic activities were recognised ...
Oliver Amft, Clemens Lombriser, Thomas Stiefmeier,...
IPPS
2005
IEEE
14 years 3 months ago
Comparison of Current BLAST Software on Nucleotide Sequences
The computational power needed for searching exponentially growing databases, such as GenBank, has increased dramatically. Three different implementations of the most widely used ...
I. Elizabeth Cha, Eric C. Rouchka
SAC
2005
ACM
14 years 3 months ago
Comparing approaches to predict transmembrane domains in protein sequences
There are today several systems for predicting transmembrane domains in membrane protein sequences. As they are based on different classifiers as well as different pre- and post-p...
Paul Davidsson, Johan Hagelbäck, Kenny Svenss...
ISAAC
2004
Springer
114views Algorithms» more  ISAAC 2004»
14 years 3 months ago
Structural Alignment of Two RNA Sequences with Lagrangian Relaxation
RNA is generally a single-stranded molecule where the bases form hydrogen bonds within the same molecule leading to structure formation. In comparing different homologous RNA mole...
Markus Bauer, Gunnar W. Klau