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» A Generalization of Automatic Sequences
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BMCBI
2005
100views more  BMCBI 2005»
15 years 4 months ago
Evolutionary models for insertions and deletions in a probabilistic modeling framework
Background: Probabilistic models for sequence comparison (such as hidden Markov models and pair hidden Markov models for proteins and mRNAs, or their context-free grammar counterp...
Elena Rivas
BMCBI
2004
252views more  BMCBI 2004»
15 years 4 months ago
Applying Support Vector Machines for Gene ontology based gene function prediction
Background: The current progress in sequencing projects calls for rapid, reliable and accurate function assignments of gene products. A variety of methods has been designed to ann...
Arunachalam Vinayagam, Rainer König, Jutta Mo...
STOC
2004
ACM
61views Algorithms» more  STOC 2004»
16 years 5 months ago
The zero-one principle for switching networks
Recently, approximation analysis has been extensively used to study algorithms for routing weighted packets in various network settings. Although different techniques were applied...
Yossi Azar, Yossi Richter
CCECE
2006
IEEE
15 years 10 months ago
Evaluation of RNA Secondary Structure Motifs using Regression Analysis
Recent experimental evidences have shown that ribonucleic acid (RNA) plays a greater role in the cell than previously thought. An ensemble of RNA sequences believed to contain sig...
Mohammad Anwar, Marcel Turcotte
BMCBI
2010
105views more  BMCBI 2010»
15 years 4 months ago
Subdivision of the MDR superfamily of medium-chain dehydrogenases/reductases through iterative hidden Markov model refinement
Background: The Medium-chain Dehydrogenases/Reductases (MDR) form a protein superfamily whose size and complexity defeats traditional means of subclassification; it currently has ...
Joel Hedlund, Hans Jörnvall, Bengt Persson