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» A Graph Theoretic Approach to Protein Structure Selection
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SAC
2009
ACM
14 years 3 months ago
On a discretizable subclass of instances of the molecular distance geometry problem
The molecular distance geometry problem can be formulated as the problem of finding an immersion in R3 of a given undirected, nonnegatively weighted graph G. In this paper, we di...
Carlile Lavor, Leo Liberti, Antonio Mucherino, Nel...
CSB
2003
IEEE
108views Bioinformatics» more  CSB 2003»
14 years 1 months ago
A Pattern Matching Algorithm for Codon Optimization and CpG Motif-Engineering in DNA Expression Vectors
Codon optimization enhances the efficiency of DNA expression vectors used in DNA vaccination and gene therapy by increasing protein expression. Additionally, certain nucleotide mo...
Ravi Vijaya Satya, Amar Mukherjee, Udaykumar Ranga
DASFAA
2009
IEEE
96views Database» more  DASFAA 2009»
14 years 3 months ago
Materialized View Selection in XML Databases
Materialized views, a rdbms silver bullet, demonstrate its efficacy in many applications, especially as a data warehousing/decison support system tool. The pivot of playing materia...
Nan Tang, Jeffrey Xu Yu, Hao Tang, M. Tamer Ö...
PAM
2004
Springer
14 years 2 months ago
Geometric Exploration of the Landmark Selection Problem
Abstract. Internet coordinate systems appear promising as a method for estimating network distance without direct measurement, allowing scalable configuration of emerging applicat...
Liying Tang, Mark Crovella
GBRPR
2009
Springer
14 years 3 months ago
Edition within a Graph Kernel Framework for Shape Recognition
A large family of shape comparison methods is based on a medial axis transform combined with an encoding of the skeleton by a graph. Despite many qualities this encoding of shapes ...
François-Xavier Dupé, Luc Brun