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RECOMB
2010
Springer
15 years 11 months ago
Incremental Signaling Pathway Modeling by Data Integration
Constructing quantitative dynamic models of signaling pathways is an important task for computational systems biology. Pathway model construction is often an inherently incremental...
Geoffrey Koh, David Hsu, P. S. Thiagarajan
140
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UML
2005
Springer
15 years 9 months ago
Use Cases in Model-Driven Software Engineering
Use cases have achieved wide use as specification tools for systems observable behavior, but there still remains a large gap between specifying behavior and determining the softwar...
Hernán Astudillo, Gonzalo Génova, Mi...
123
Voted
CCR
2008
76views more  CCR 2008»
15 years 4 months ago
WebClass: adding rigor to manual labeling of traffic anomalies
Despite the flurry of anomaly-detection papers in recent years, effective ways to validate and compare proposed solutions have remained elusive. We argue that evaluating anomaly d...
Haakon Ringberg, Augustin Soule, Jennifer Rexford
BMCBI
2004
228views more  BMCBI 2004»
15 years 4 months ago
An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...

Lecture Notes
1005views
17 years 4 months ago
Lectures on reconfigurable computing
Driven by recent innovations in Field-Programmable Gate Arrays (FPGAs), reconfigurable computing offers unique ways to accelerate key algorithms. FPGAs offer a programmable logic f...
Sherief Reda