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» A High Performance Exact Histogram Specification Algorithm
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FPL
2008
Springer
150views Hardware» more  FPL 2008»
13 years 10 months ago
Compiler generated systolic arrays for wavefront algorithm acceleration on FPGAs
Wavefront algorithms, such as the Smith-Waterman algorithm, are commonly used in bioinformatics for exact local and global sequence alignment. These algorithms are highly computat...
Betul Buyukkurt, Walid A. Najjar
ANCS
2009
ACM
13 years 6 months ago
Divide and discriminate: algorithm for deterministic and fast hash lookups
Exact and approximate membership lookups are among the most widely used primitives in a number of network applications. Hash tables are commonly used to implement these primitive ...
Domenico Ficara, Stefano Giordano, Sailesh Kumar, ...
ASAP
2004
IEEE
185views Hardware» more  ASAP 2004»
14 years 22 days ago
Families of FPGA-Based Algorithms for Approximate String Matching
Dynamic programming for approximate string matching is a large family of different algorithms, which vary significantly in purpose, complexity, and hardware utilization. Many impl...
Tom Van Court, Martin C. Herbordt
CCE
2005
13 years 8 months ago
Numerical simulation of stochastic gene circuits
Armed with increasingly fast supercomputers and greater knowledge of the molecular mechanisms of gene expression, it is now practical to numerically simulate complex networks of r...
Howard Salis, Yiannis N. Kaznessis
ICDE
2002
IEEE
175views Database» more  ICDE 2002»
14 years 10 months ago
Detecting Changes in XML Documents
We present a diff algorithm for XML data. This work is motivated by the support for change control in the context of the Xyleme project that is investigating dynamic warehouses ca...
Gregory Cobena, Serge Abiteboul, Amélie Mar...