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» A Kernel Between Sets of Vectors
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BMCBI
2008
145views more  BMCBI 2008»
13 years 7 months ago
Directed acyclic graph kernels for structural RNA analysis
Background: Recent discoveries of a large variety of important roles for non-coding RNAs (ncRNAs) have been reported by numerous researchers. In order to analyze ncRNAs by kernel ...
Kengo Sato, Toutai Mituyama, Kiyoshi Asai, Yasubum...
BMCBI
2006
120views more  BMCBI 2006»
13 years 7 months ago
Optimizing amino acid substitution matrices with a local alignment kernel
Background: Detecting remote homologies by direct comparison of protein sequences remains a challenging task. We had previously developed a similarity score between sequences, cal...
Hiroto Saigo, Jean-Philippe Vert, Tatsuya Akutsu
IJCNN
2000
IEEE
13 years 12 months ago
A Neural Support Vector Network Architecture with Adaptive Kernels
In the Support Vector Machines (SVM) framework, the positive-definite kernel can be seen as representing a fixed similarity measure between two patterns, and a discriminant func...
Pascal Vincent, Yoshua Bengio
MICAI
2007
Springer
14 years 1 months ago
Variants of Tree Kernels for XML Documents
In this paper, we discuss tree kernels that can be applied for the classification of XML documents based on their DOM trees. DOM trees are ordered trees, in which every node might...
Peter Geibel, Helmar Gust, Kai-Uwe Kühnberger
ICML
2008
IEEE
14 years 8 months ago
Localized multiple kernel learning
Recently, instead of selecting a single kernel, multiple kernel learning (MKL) has been proposed which uses a convex combination of kernels, where the weight of each kernel is opt...
Ethem Alpaydin, Mehmet Gönen