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BMCBI
2008
86views more  BMCBI 2008»
15 years 4 months ago
Subfamily specific conservation profiles for proteins based on n-gram patterns
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
John K. Vries, Xiong Liu
GCB
2000
Springer
137views Biometrics» more  GCB 2000»
15 years 8 months ago
Detecting Sporadic Recombination in DNA Alignments with Hidden Markov Models
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...
Dirk Husmeier, Frank Wright
BMCBI
2006
159views more  BMCBI 2006»
15 years 4 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
PRL
2011
14 years 11 months ago
Temporal synchronization of non-overlapping videos using known object motion
This paper presents a robust technique for temporally aligning multiple video sequences that have no spatial overlap between their fields of view. It is assumed that (i) a moving...
Darlan N. Brito, Flávio L. C. Pádua,...
BMCBI
2005
162views more  BMCBI 2005»
15 years 4 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes