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VLSID
2007
IEEE
131views VLSI» more  VLSID 2007»
14 years 9 months ago
Defect-Aware Synthesis of Droplet-Based Microfluidic Biochips
Recent advances in microfluidics technology have led to the emergence of miniaturized biochip devices for biochemical analysis. A promising category of microfluidic biochips relie...
Tao Xu, Krishnendu Chakrabarty, Fei Su
RECOMB
2008
Springer
14 years 9 months ago
High-Resolution Modeling of Cellular Signaling Networks
A central challenge in systems biology is the reconstruction of biological networks from high-throughput data sets. A particularly difficult case of this is the inference of dynami...
Michael Baym, Chris Bakal, Norbert Perrimon, Bonni...
SAC
2009
ACM
14 years 3 months ago
Modular implementation of adaptive decisions in stochastic simulations
We present a modular approach to implement adaptive decisions with existing scientific codes. Using a sophisticated system software tool based on the function call interception t...
Pilsung Kang 0002, Yang Cao, Naren Ramakrishnan, C...
CMSB
2009
Springer
14 years 3 months ago
Modelling Biological Clocks with Bio-PEPA: Stochasticity and Robustness for the Neurospora crassa Circadian Network
Circadian clocks are biochemical networks, present in nearly all living organisms, whose function is to regulate the expression of specific mRNAs and proteins to synchronise rhyth...
Ozgur E. Akman, Federica Ciocchetta, Andrea Degasp...
ISCIS
2009
Springer
14 years 3 months ago
A web-based data source for metabolomics
—With the development of improved and cost-effective technologies, it is now possible to detect thousands of metabolites in biofluids or specific organs, and reliably quantify th...
Ali Cakmak, Arun Dsouza, Richard Hanson, Gultekin ...