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DASFAA
2008
IEEE
137views Database» more  DASFAA 2008»
13 years 10 months ago
Efficient Mining of Recurrent Rules from a Sequence Database
We study a novel problem of mining significant recurrent rules from a sequence database. Recurrent rules have the form "whenever a series of precedent events occurs, eventuall...
David Lo, Siau-Cheng Khoo, Chao Liu 0001
RECOMB
2005
Springer
14 years 8 months ago
Improved Recombination Lower Bounds for Haplotype Data
Recombination is an important evolutionary mechanism responsible for the genetic diversity in humans and other organisms. Recently, there has been extensive research on understandi...
Vineet Bafna, Vikas Bansal
DASFAA
2005
IEEE
209views Database» more  DASFAA 2005»
14 years 2 months ago
PADS: Protein Structure Alignment Using Directional Shape Signatures
A novel approach for similarity search on the protein structure databases is proposed. PADS (Protein Alignment by Directional shape Signatures) incorporates the three dimensional ...
S. Alireza Aghili, Divyakant Agrawal, Amr El Abbad...
BMCBI
2006
127views more  BMCBI 2006»
13 years 8 months ago
Automatic discovery of cross-family sequence features associated with protein function
Background: Methods for predicting protein function directly from amino acid sequences are useful tools in the study of uncharacterised protein families and in comparative genomic...
Markus Brameier, Josien Haan, Andrea Krings, Rober...
ICALP
2001
Springer
14 years 1 months ago
Permutation Editing and Matching via Embeddings
Abstract. If the genetic maps of two species are modelled as permutations of (homologous) genes, the number of chromosomal rearrangements in the form of deletions, block moves, inv...
Graham Cormode, S. Muthukrishnan, Süleyman Ce...