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» A Linear Time Algorithm for L(2, 1)-Labeling of Trees
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APPROX
2005
Springer
106views Algorithms» more  APPROX 2005»
14 years 2 months ago
Approximating the Bandwidth of Caterpillars
A caterpillar is a tree in which all vertices of degree three or more lie on one path, called the backbone. We present a polynomial time algorithm that produces a linear arrangeme...
Uriel Feige, Kunal Talwar
BIRD
2008
Springer
162views Bioinformatics» more  BIRD 2008»
13 years 11 months ago
Suffix Tree Characterization of Maximal Motifs in Biological Sequences
Finding motifs in biological sequences is one of the most intriguing problems for string algorithms designers due to, on the one hand, the numerous applications of this problem in...
Maria Federico, Nadia Pisanti
HICSS
2003
IEEE
90views Biometrics» more  HICSS 2003»
14 years 2 months ago
A Prototype for Multiple Whole Genome Alignment
In this paper, we briefly describe a prototype of the software system we have developed for multiple whole genome alignment. To develop our algorithm, we have to solve several pr...
Jitender S. Deogun, Fangrui Ma, Jingyi Yang, Andre...
ESA
2010
Springer
172views Algorithms» more  ESA 2010»
13 years 10 months ago
Algorithmic Meta-theorems for Restrictions of Treewidth
Abstract. Possibly the most famous algorithmic meta-theorem is Courcelle's theorem, which states that all MSO-expressible graph properties are decidable in linear time for gra...
Michael Lampis
VLSID
2007
IEEE
126views VLSI» more  VLSID 2007»
14 years 9 months ago
An ECO Technique for Removing Crosstalk Violations in Clock Networks
Crosstalk noise in the clock network of digital circuits is often detected late in the design cycle, sometimes as late as after first silicon. It is therefore necessary to fix cros...
Amit Kumar, Krishnendu Chakrabarty, Chunduri Rama ...