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OSDI
1996
ACM
15 years 5 months ago
Automatic Compiler-Inserted I/O Prefetching for Out-of-Core Applications
Current operating systems offer poor performance when a numeric application's working set does not fit in main memory. As a result, programmers who wish to solve "out-of...
Todd C. Mowry, Angela K. Demke, Orran Krieger
JPDC
2008
135views more  JPDC 2008»
15 years 4 months ago
Fast parallel GPU-sorting using a hybrid algorithm
This paper presents an algorithm for fast sorting of large lists using modern GPUs. The method achieves high speed by efficiently utilizing the parallelism of the GPU throughout th...
Erik Sintorn, Ulf Assarsson
BMCBI
2005
87views more  BMCBI 2005»
15 years 4 months ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...
OOPSLA
2010
Springer
15 years 2 months ago
Hera-JVM: a runtime system for heterogeneous multi-core architectures
Heterogeneous multi-core processors, such as the IBM Cell processor, can deliver high performance. However, these processors are notoriously difficult to program: different cores...
Ross McIlroy, Joe Sventek
PROCEDIA
2011
14 years 7 months ago
GPU-accelerated Chemical Similarity Assessment for Large Scale Databases
The assessment of chemical similarity between molecules is a basic operation in chemoinformatics, a computational area concerning with the manipulation of chemical structural info...
Marco Maggioni, Marco D. Santambrogio, Jie Liang