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BMCBI
2008
135views more  BMCBI 2008»
13 years 8 months ago
Inferring the role of transcription factors in regulatory networks
Background: Expression profiles obtained from multiple perturbation experiments are increasingly used to reconstruct transcriptional regulatory networks, from well studied, simple...
Philippe Veber, Carito Guziolowski, Michel Le Borg...
SEMWEB
2007
Springer
14 years 2 months ago
Semantic Enterprise Technologies
Abstract. Nowadays enterprises request information technologies that leverage structured and unstructured information for providing a single integrated view of business problems in...
Massimo Ruffolo, Luigi Guadagno, Inderbir Sidhu
BMCBI
2005
152views more  BMCBI 2005»
13 years 8 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
COLING
2010
13 years 3 months ago
Resolving Surface Forms to Wikipedia Topics
Ambiguity of entity mentions and concept references is a challenge to mining text beyond surface-level keywords. We describe an effective method of disambiguating surface forms an...
Yiping Zhou, Lan Nie, Omid Rouhani-Kalleh, Flavian...
DAC
2005
ACM
14 years 9 months ago
Fine-grained application source code profiling for ASIP design
Current Application Specific Instruction set Processor (ASIP) design methodologies are mostly based on iterative architecture exploration that uses Architecture Description Langua...
Kingshuk Karuri, Mohammad Abdullah Al Faruque, Ste...