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BMCBI
2011
12 years 11 months ago
Efficient alignment of pyrosequencing reads for re-sequencing applications
Background: Over the past few years, new massively parallel DNA sequencing technologies have emerged. These platforms generate massive amounts of data per run, greatly reducing th...
Francisco Fernandes, Paulo G. S. da Fonseca, Lu&ia...
CIKM
2007
Springer
14 years 1 months ago
Regularized locality preserving indexing via spectral regression
We consider the problem of document indexing and representation. Recently, Locality Preserving Indexing (LPI) was proposed for learning a compact document subspace. Different from...
Deng Cai, Xiaofei He, Wei Vivian Zhang, Jiawei Han
BMCBI
2006
159views more  BMCBI 2006»
13 years 7 months ago
EVEREST: automatic identification and classification of protein domains in all protein sequences
Background: Proteins are comprised of one or several building blocks, known as domains. Such domains can be classified into families according to their evolutionary origin. Wherea...
Elon Portugaly, Amir Harel, Nathan Linial, Michal ...
CODES
2008
IEEE
13 years 9 months ago
Profiling of lossless-compression algorithms for a novel biomedical-implant architecture
In view of a booming market for microelectronic implants, our ongoing research work is focusing on the specification and design of a novel biomedical microprocessor core targeting...
Christos Strydis, Georgi Gaydadjiev
PPOPP
2009
ACM
14 years 8 months ago
Mapping parallelism to multi-cores: a machine learning based approach
The efficient mapping of program parallelism to multi-core processors is highly dependent on the underlying architecture. This paper proposes a portable and automatic compiler-bas...
Zheng Wang, Michael F. P. O'Boyle