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ICML
2006
IEEE
14 years 9 months ago
A graphical model for predicting protein molecular function
We present a simple statistical model of molecular function evolution to predict protein function. The model description encodes general knowledge of how molecular function evolve...
Barbara E. Engelhardt, Michael I. Jordan, Steven E...
SIAMCOMP
1998
138views more  SIAMCOMP 1998»
13 years 8 months ago
Dynamic Trees and Dynamic Point Location
This paper describes new methods for maintaining a point-location data structure for a dynamically changing monotone subdivision S. The main approach is based on the maintenance of...
Michael T. Goodrich, Roberto Tamassia
BMCBI
2010
153views more  BMCBI 2010»
13 years 8 months ago
VITCOMIC: visualization tool for taxonomic compositions of microbial communities based on 16S rRNA gene sequences
Background: Understanding the community structure of microbes is typically accomplished by sequencing 16S ribosomal RNA (16S rRNA) genes. These community data can be represented b...
Hiroshi Mori, Fumito Maruyama, Ken Kurokawa
BMCBI
2008
145views more  BMCBI 2008»
13 years 8 months ago
The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction
Background: Amino acids responsible for structure, core function or specificity may be inferred from multiple protein sequence alignments where a limited set of residue types are ...
Jonathan R. Manning, Emily R. Jefferson, Geoffrey ...
WISE
2005
Springer
14 years 2 months ago
NET - A System for Extracting Web Data from Flat and Nested Data Records
This paper studies automatic extraction of structured data from Web pages. Each of such pages may contain several groups of structured data records. Existing automatic methods stil...
Bing Liu, Yanhong Zhai