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» A Multi-Stack Based Phylogenetic Tree Building Method
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BIBM
2008
IEEE
144views Bioinformatics» more  BIBM 2008»
14 years 1 months ago
PhyQL: A Web-Based Phylogenetic Visual Query Engine
Biologists are often interested to query published phylogenetic data for research purposes. PhyQL, a web-based visual phylogenetic query engine, can be quite useful on this regard...
Shahriyar Hossain, Munirul Islam, Jesmin, Hasan M....
BMCBI
2010
118views more  BMCBI 2010»
13 years 7 months ago
Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests
Background: To understand the evolutionary role of Lateral Gene Transfer (LGT), accurate methods are needed to identify transferred genes and infer their timing of acquisition. Ph...
Sophie S. Abby, Eric Tannier, Manolo Gouy, Vincent...
ISBRA
2010
Springer
14 years 2 months ago
Fast Computation of the Exact Hybridization Number of Two Phylogenetic Trees
Abstract. Hybridization is a reticulate evolutionary process. An established problem on hybridization is computing the minimum number of hybridization events, called the hybridizat...
Yufeng Wu, Jiayin Wang
WEA
2007
Springer
114views Algorithms» more  WEA 2007»
14 years 1 months ago
Improving Tree Search in Phylogenetic Reconstruction from Genome Rearrangement Data
Abstract. A major task in evolutionary biology is to determine the ancestral relationships among the known species, a process generally referred as phylogenetic reconstruction. In ...
Fei Ye, Yan Guo, Andrew Lawson, Jijun Tang
ISMB
2001
13 years 8 months ago
Designing fast converging phylogenetic methods
Abstract: Absolute fast converging phylogenetic reconstruction methods are provably guaranteed to recover the true tree with high probability from sequences that grow only polynomi...
Luay Nakhleh, Usman Roshan, Katherine St. John, Je...