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» A New Approach to Conformant Planning Using CNF*
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BMCBI
2010
154views more  BMCBI 2010»
13 years 7 months ago
Binary image representation of a ligand binding site: its application to efficient sampling of a conformational ensemble
Background: Modelling the ligand binding site of a protein is an important component of understanding proteinligand interactions and is being actively studied. Even if the side ch...
Edon Sung, Sangsoo Kim, Whanchul Shin
JSAT
2006
134views more  JSAT 2006»
13 years 7 months ago
Pueblo: A Hybrid Pseudo-Boolean SAT Solver
This paper introduces a new hybrid method for efficiently integrating Pseudo-Boolean (PB) constraints into generic SAT solvers in order to solve PB satisfiability and optimization...
Hossein M. Sheini, Karem A. Sakallah
BMCBI
2008
133views more  BMCBI 2008»
13 years 7 months ago
MS-DOCK: Accurate multiple conformation generator and rigid docking protocol for multi-step virtual ligand screening
Background: The number of protein targets with a known or predicted tri-dimensional structure and of drug-like chemical compounds is growing rapidly and so is the need for new the...
Nicolas Sauton, David Lagorce, Bruno O. Villoutrei...
JAIR
2011
123views more  JAIR 2011»
13 years 2 months ago
Regression Conformal Prediction with Nearest Neighbours
In this paper we apply Conformal Prediction (CP) to the k-Nearest Neighbours Regression (k-NNR) algorithm and propose ways of extending the typical nonconformity measure used for ...
Harris Papadopoulos, Vladimir Vovk, Alexander Gamm...
AAAI
2010
13 years 8 months ago
Conformal Mapping by Computationally Efficient Methods
Dimensionality reduction is the process by which a set of data points in a higher dimensional space are mapped to a lower dimension while maintaining certain properties of these p...
Stefan Pintilie, Ali Ghodsi