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» A New Approach to Protein Structure Mining and Alignment
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ILP
2003
Springer
14 years 1 months ago
Relational IBL in Music with a New Structural Similarity Measure
It is well known that many hard tasks considered in machine learning and data mining can be solved in an rather simple and robust way with an instance- and distance-based approach....
Asmir Tobudic, Gerhard Widmer
LSSC
2007
Springer
14 years 2 months ago
An Ant-Based Model for Multiple Sequence Alignment
Abstract. Multiple sequence alignment is a key process in today’s biology, and finding a relevant alignment of several sequences is much more challenging than just optimizing so...
Frédéric Guinand, Yoann Pigné
COMPLIFE
2006
Springer
14 years 5 days ago
A Point-Matching Based Algorithm for 3D Surface Alignment of Drug-Sized Molecules
Abstract. Molecular shapes play an important role in molecular interactions, e.g., between a protein and a ligand. The `outer' shape of a molecule can be approximated by its s...
Daniel Baum, Hans-Christian Hege
KDD
2004
ACM
137views Data Mining» more  KDD 2004»
14 years 1 months ago
Mining scale-free networks using geodesic clustering
Many real-world graphs have been shown to be scale-free— vertex degrees follow power law distributions, vertices tend to cluster, and the average length of all shortest paths is...
Andrew Y. Wu, Michael Garland, Jiawei Han
BMCBI
2008
130views more  BMCBI 2008»
13 years 8 months ago
An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories
Background: Understanding how proteins fold is essential to our quest in discovering how life works at the molecular level. Current computation power enables researchers to produc...
Hong Sun, Hakan Ferhatosmanoglu, Motonori Ota, Yus...