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» A New Approach to Protein Structure Mining and Alignment
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WABI
2005
Springer
14 years 1 months ago
Rotamer-Pair Energy Calculations Using a Trie Data Structure
Abstract. Protein design software places amino acid side chains by precomputing rotamer-pair energies and optimizing rotamer placement. If the software optimizes by rapid stochasti...
Andrew Leaver-Fay, Brian Kuhlman, Jack Snoeyink
IJCBDD
2010
127views more  IJCBDD 2010»
13 years 7 months ago
Predicting protein complexes by data integration of different types of interactions
: The explosion of highthroughput interaction data from proteomics studies gives us the opportunity to integrate Protein-Protein Interactions (PPI) from different type of interacti...
Powell Patrick Cheng Tan, Daryanaz Dargahi, Freder...
BMCBI
2005
153views more  BMCBI 2005»
13 years 8 months ago
Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical
Background: Routine application of gene expression microarray technology is rapidly producing large amounts of data that necessitate new approaches of analysis. The analysis of a ...
Giacomo Finocchiaro, Francesco Mancuso, Heiko M&uu...
WWW
2007
ACM
14 years 9 months ago
Mining contiguous sequential patterns from web logs
Finding Contiguous Sequential Patterns (CSP) is an important problem in Web usage mining. In this paper we propose a new data structure, UpDown Tree, for CSP mining. An UpDown Tre...
Jinlin Chen, Terry Cook
BMCBI
2010
158views more  BMCBI 2010»
13 years 8 months ago
A Bayesian network approach to feature selection in mass spectrometry data
Background: Time-of-flight mass spectrometry (TOF-MS) has the potential to provide non-invasive, high-throughput screening for cancers and other serious diseases via detection of ...
Karl W. Kuschner, Dariya I. Malyarenko, William E....