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» A New Approach to Protein Structure Mining and Alignment
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KDD
2002
ACM
144views Data Mining» more  KDD 2002»
14 years 9 months ago
Efficiently mining frequent trees in a forest
Mining frequent trees is very useful in domains like bioinformatics, web mining, mining semi-structured data, and so on. We formulate the problem of mining (embedded) subtrees in ...
Mohammed Javeed Zaki
BMCBI
2010
190views more  BMCBI 2010»
13 years 8 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
ICNSC
2008
IEEE
14 years 2 months ago
Multiple Sequence Alignment Based on Genetic Algorithms with Reserve Selection
— This paper presents an approach to the multiple sequence alignment (MSA) problem by applying genetic algorithms with a reserve selection mechanism. MSA is one of the most funda...
Yang Chen, Jinglu Hu, Kotaro Hirasawa, Songnian Yu
BMCBI
2010
163views more  BMCBI 2010»
13 years 8 months ago
Integration of open access literature into the RCSB Protein Data Bank using BioLit
Background: Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been ...
Andreas Prlic, Marco A. Martinez, Dimitris Dimitro...
ISBI
2009
IEEE
14 years 3 months ago
A Data-Driven Approach to Discovering Common Brain Anatomy
An atlas defines a common coordinate system to enable the comparison of data from different subjects. Key in the development of a brain atlas are the identification of a common ...
Neil I. Weisenfeld, Simon K. Warfield