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JCB
2007
106views more  JCB 2007»
13 years 8 months ago
Clustered Sequence Representation for Fast Homology Search
We present a novel approach to managing redundancy in sequence databanks such as GenBank. We store clusters of near-identical sequences as a representative union-sequence and a se...
Michael Cameron, Yaniv Bernstein, Hugh E. Williams
CATA
1998
13 years 9 months ago
QVI: Query-based virtual index for distributed information retrieval
The large unstructured text collections demand full-text search capabilities from IR systems. Current systems typically allow users only to connect to a single database (or site) ...
Dong-gyu Kim, Sang-goo Lee
ICMCS
2008
IEEE
138views Multimedia» more  ICMCS 2008»
14 years 2 months ago
Using H.264 coded block patterns for fast inter-mode selection
The support of variable block-sizes, though significantly improves the compression efficiency, imposes a big computational challenge on an H.264 encoder. In this paper, we present...
Bo-Yuan Chen, Shih-Hsuan Yang
JCB
2007
136views more  JCB 2007»
13 years 8 months ago
A Structure-Based Flexible Search Method for Motifs in RNA
The discovery of non-coding RNA (ncRNA) motifs and their role in regulating gene expression has recently attracted considerable attention. The goal is to discover these motifs in ...
Isana Veksler-Lublinsky, Michal Ziv-Ukelson, Danny...
BMCBI
2008
108views more  BMCBI 2008»
13 years 8 months ago
A nonparametric model for quality control of database search results in shotgun proteomics
Background: Analysis of complex samples with tandem mass spectrometry (MS/MS) has become routine in proteomic research. However, validation of database search results creates a bo...
Jiyang Zhang, Jianqi Li, Xin Liu, Hongwei Xie, Yun...