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GCB
2004
Springer
91views Biometrics» more  GCB 2004»
14 years 23 days ago
A Method for Fast Approximate Searching of Polypeptide Structures in the PDB
: The main contribution of this paper is a novel approach for fast searching in huge structural databases like the PDB. The data structure is based on an adaption of the generalize...
Hanjo Täubig, Arno Buchner, Jan Griebsch
BIBE
2005
IEEE
107views Bioinformatics» more  BIBE 2005»
14 years 1 months ago
DSIM: A Distance-Based Indexing Method for Genomic Sequences
In this paper, we propose a Distance-based Sequence Indexing Method (DSIM) for indexing and searching genome databases. Borrowing the idea of video compression, we compress the ge...
Xia Cao, Beng Chin Ooi, HweeHwa Pang, Kian-Lee Tan...
ADC
2007
Springer
183views Database» more  ADC 2007»
13 years 11 months ago
Efficient Similarity Search by Summarization in Large Video Database
With the explosion of video data, video processing technologies have advanced quickly and been applied into many fields, such as advertisements, medical etc.. To fast search these...
Xiangmin Zhou, Xiaofang Zhou, Heng Tao Shen
DCC
1995
IEEE
13 years 11 months ago
Accelerating Fractal Image Compression by Multi-Dimensional Nearest Neighbor Search
: In fractal image compression the encoding step is computationally expensive. A large number of sequential searches through a list of domains (portions of the image) are carried o...
Dietmar Saupe
BMCBI
2006
129views more  BMCBI 2006»
13 years 7 months ago
Fast index based algorithms and software for matching position specific scoring matrices
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
Michael Beckstette, Robert Homann, Robert Giegeric...