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ICPP
2006
IEEE
14 years 1 months ago
A Parallel External-Memory Frontier Breadth-First Traversal Algorithm for Clusters of Workstations
— This paper presents a parallel external-memory algorithm for performing a breadth-first traversal of an implicit graph on a cluster of workstations. The algorithm is a paralle...
Robert Niewiadomski, José Nelson Amaral, Ro...
PPSN
2004
Springer
14 years 1 months ago
An Evolutionary Algorithm for the Maximum Weight Trace Formulation of the Multiple Sequence Alignment Problem
Abstract. The multiple sequence alignment problem (MSA) can be reformulated as the problem of finding a maximum weight trace in an alignment graph, which is derived from all pairw...
Gabriele Koller, Günther R. Raidl
WAE
2001
281views Algorithms» more  WAE 2001»
13 years 9 months ago
Using PRAM Algorithms on a Uniform-Memory-Access Shared-Memory Architecture
The ability to provide uniform shared-memory access to a significant number of processors in a single SMP node brings us much closer to the ideal PRAM parallel computer. In this pa...
David A. Bader, Ajith K. Illendula, Bernard M. E. ...
SC
2003
ACM
14 years 27 days ago
A New Parallel Kernel-Independent Fast Multipole Method
We present a new adaptive fast multipole algorithm and its parallel implementation. The algorithm is kernel-independent in the sense that the evaluation of pairwise interactions do...
Lexing Ying, George Biros, Denis Zorin, Harper Lan...
WG
2009
Springer
14 years 2 months ago
Fully Dynamic Representations of Interval Graphs
We present a fully dynamic algorithm that maintains three different representations of an interval graph: a minimal interval model of the graph, the PQ-tree of its maximal cliques...
Christophe Crespelle