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PDP
2008
IEEE
14 years 3 months ago
Internet-Scale Simulations of a Peer Selection Algorithm
The match between a peer-to-peer overlay and the physical Internet infrastructure is a constant issue. Time-constrained peer-to-peer applications such as live streaming systems ar...
Ali Boudani, Yiping Chen, Gilles Straub, Gwendal S...
ALGORITHMICA
2005
195views more  ALGORITHMICA 2005»
13 years 9 months ago
Bit-Parallel Witnesses and Their Applications to Approximate String Matching
We present a new bit-parallel technique for approximate string matching. We build on two previous techniques. The first one, BPM [Myers, J. of the ACM, 1999], searches for a patte...
Heikki Hyyrö, Gonzalo Navarro
IPPS
2002
IEEE
14 years 2 months ago
A Parallel Two-Level Hybrid Method for Diagonal Dominant Tridiagonal Systems
A new method, namely the Parallel Two-Level Hybrid (PTH) method, is developed to solve tridiagonal systems on parallel computers. PTH is designed based on Parallel Diagonal Domina...
Xian-He Sun, Wu Zhang
IPPS
2006
IEEE
14 years 3 months ago
Multiple sequence alignment by quantum genetic algorithm
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
L. Abdesslem, M. Soham, B. Mohamed
IPPS
2003
IEEE
14 years 2 months ago
Parallel Detection of Regulatory Elements with gMP
The detection of regulatory elements from a large set of regulatory regions is a challenging problem in computational genomics. However, computational methods to extract this biol...
Bertil Schmidt, Lin Feng, Amey V. Laud, Yusdi Sant...