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» A New Similarity Measure among Protein Sequences
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BMCBI
2008
117views more  BMCBI 2008»
13 years 8 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...
JVCIR
2008
137views more  JVCIR 2008»
13 years 7 months ago
A fast MPEG-7 dominant color extraction with new similarity measure for image retrieval
Dominant color descriptor (DCD) is one of the color descriptors proposed by MPEG-7 that has been extensively used for image retrieval. Among the color descriptors, DCD describes t...
Nai-Chung Yang, Wei-Han Chang, Chung Ming Kuo, Tsi...
BMCBI
2008
163views more  BMCBI 2008»
13 years 8 months ago
ProfileGrids as a new visual representation of large multiple sequence alignments: a case study of the RecA protein family
Background: Multiple sequence alignments are a fundamental tool for the comparative analysis of proteins and nucleic acids. However, large data sets are no longer manageable for v...
Alberto I. Roca, Albert E. Almada, Aaron C. Abajia...
SNPD
2004
13 years 9 months ago
Using extended phylogenetc profiles and support vector machines for protein family classification
We proposed a new approach to compare profiles when the correlations among attributes can be represented as a tree. To account for these correlations, the profile is extended with...
Kishore Narra, Li Liao
BMCBI
2010
178views more  BMCBI 2010»
13 years 8 months ago
An improved method for scoring protein-protein interactions using semantic similarity within the Gene Ontology
Background: Semantic similarity measures are useful to assess the physiological relevance of protein-protein interactions (PPIs). They quantify similarity between proteins based o...
Shobhit Jain, Gary D. Bader