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» A New Smoothing Model for Analyzing Array CGH Data
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BMCBI
2004
165views more  BMCBI 2004»
13 years 7 months ago
Analysis of oligonucleotide array experiments with repeated measures using mixed models
Background: Two or more factor mixed factorial experiments are becoming increasingly common in microarray data analysis. In this case study, the two factors are presence (Patients...
Hao Li, Constance L. Wood, Thomas V. Getchell, Mar...
BMCBI
2008
98views more  BMCBI 2008»
13 years 7 months ago
Empirical Bayes models for multiple probe type microarrays at the probe level
Background: When analyzing microarray data a primary objective is often to find differentially expressed genes. With empirical Bayes and penalized t-tests the sample variances are...
Magnus Åstrand, Petter Mostad, Mats Rudemo
KDD
2008
ACM
155views Data Mining» more  KDD 2008»
14 years 7 months ago
Factorization meets the neighborhood: a multifaceted collaborative filtering model
Recommender systems provide users with personalized suggestions for products or services. These systems often rely on Collaborating Filtering (CF), where past transactions are ana...
Yehuda Koren
CLEIEJ
2007
152views more  CLEIEJ 2007»
13 years 7 months ago
Gene Expression Analysis using Markov Chains extracted from RNNs
Abstract. This paper present a new approach for the analysis of gene expression, by extracting a Markov Chain from trained Recurrent Neural Networks (RNNs). A lot of microarray dat...
Igor Lorenzato Almeida, Denise Regina Pechmann Sim...
CORR
2006
Springer
76views Education» more  CORR 2006»
13 years 7 months ago
Inconsistent parameter estimation in Markov random fields: Benefits in the computation-limited setting
Consider the problem of joint parameter estimation and prediction in a Markov random field: i.e., the model parameters are estimated on the basis of an initial set of data, and th...
Martin J. Wainwright