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» A Note on Difference Sets
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ALMOB
2006
102views more  ALMOB 2006»
13 years 9 months ago
Mining, compressing and classifying with extensible motifs
Background: Motif patterns of maximal saturation emerged originally in contexts of pattern discovery in biomolecular sequences and have recently proven a valuable notion also in t...
Alberto Apostolico, Matteo Comin, Laxmi Parida
ALMOB
2006
155views more  ALMOB 2006»
13 years 9 months ago
Refining motifs by improving information content scores using neighborhood profile search
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
ENGL
2008
78views more  ENGL 2008»
13 years 9 months ago
Threshold for Positional Weight Matrix
In biological sequence research, the positional weight matrix (PWM) is often used to search for putative transcription factor binding sites. A set of experimentally verified oligon...
Yunlian Pan, Sieu Phan
AML
2006
120views more  AML 2006»
13 years 9 months ago
On the infinite-valued Lukasiewicz logic that preserves degrees of truth
Lukasiewicz's infinite-valued logic is commonly defined as the set of formulas that take the value 1 under all evaluations in the Lukasiewicz algebra on the unit real interva...
Josep Maria Font, Àngel J. Gil, Antoni Torr...
BMCBI
2006
159views more  BMCBI 2006»
13 years 9 months ago
EpiJen: a server for multistep T cell epitope prediction
Background: The main processing pathway for MHC class I ligands involves degradation of proteins by the proteasome, followed by transport of products by the transporter associated...
Irini A. Doytchinova, Pingping Guan, Darren R. Flo...
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