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WABI
2009
Springer
129views Bioinformatics» more  WABI 2009»
14 years 2 months ago
biRNA: Fast RNA-RNA Binding Sites Prediction
We present biRNA, a novel algorithm for prediction of binding sites between two RNAs based on minimization of binding free energy. Similar to RNAup approach [30], we assume the bin...
Hamidreza Chitsaz, Rolf Backofen, Süleyman Ce...
JIIS
2002
99views more  JIIS 2002»
13 years 7 months ago
Efficient Management of Persistent Knowledge
Although computer speed has steadily increased and memory is getting cheaper, the need for storage managers to deal efficiently with applications that cannot be held into main memo...
Dimitris G. Kapopoulos, Michael Hatzopoulos, Panag...
ENVSOFT
2006
84views more  ENVSOFT 2006»
13 years 7 months ago
Modeling the fate of down-the-drain chemicals in rivers: An improved software for GREAT-ER
GREAT-ER (Geography-referenced Regional Exposure Assessment Tool for European Rivers) is a model system for predicting chemical fate and exposure in surface waters. The GREAT-ER a...
F. Koormann, J. Rominger, D. Schowanek, J.-O. Wagn...
PPOPP
2009
ACM
14 years 8 months ago
OpenMP to GPGPU: a compiler framework for automatic translation and optimization
GPGPUs have recently emerged as powerful vehicles for generalpurpose high-performance computing. Although a new Compute Unified Device Architecture (CUDA) programming model from N...
Seyong Lee, Seung-Jai Min, Rudolf Eigenmann
TPDS
2008
196views more  TPDS 2008»
13 years 7 months ago
End-to-End Energy Management in Networked Real-Time Embedded Systems
Recent technological advances have opened up a wide range of distributed real-time applications involving battery-driven embedded devices with local processing and wireless communi...
G. Sudha Anil Kumar, Govindarasu Manimaran, Zhengd...