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BMCBI
2010
135views more  BMCBI 2010»
13 years 6 months ago
Delineation of amplification, hybridization and location effects in microarray data yields better-quality normalization
Background: Oligonucleotide arrays have become one of the most widely used high-throughput tools in biology. Due to their sensitivity to experimental conditions, normalization is ...
Marc Hulsman, Anouk Mentink, Eugene P. van Someren...
CIKM
2008
Springer
13 years 8 months ago
Modeling hidden topics on document manifold
Topic modeling has been a key problem for document analysis. One of the canonical approaches for topic modeling is Probabilistic Latent Semantic Indexing, which maximizes the join...
Deng Cai, Qiaozhu Mei, Jiawei Han, Chengxiang Zhai
BMCBI
2008
147views more  BMCBI 2008»
13 years 6 months ago
Transmembrane helix prediction using amino acid property features and latent semantic analysis
Background: Prediction of transmembrane (TM) helices by statistical methods suffers from lack of sufficient training data. Current best methods use hundreds or even thousands of f...
Madhavi Ganapathiraju, Narayanas Balakrishnan, Raj...
ICDM
2008
IEEE
401views Data Mining» more  ICDM 2008»
14 years 1 months ago
Graph OLAP: Towards Online Analytical Processing on Graphs
OLAP (On-Line Analytical Processing) is an important notion in data analysis. Recently, more and more graph or networked data sources come into being. There exists a similar need ...
Chen Chen, Xifeng Yan, Feida Zhu, Jiawei Han, Phil...
BMCBI
2010
96views more  BMCBI 2010»
13 years 6 months ago
Incorporating gene co-expression network in identification of cancer prognosis markers
Background: Extensive biomedical studies have shown that clinical and environmental risk factors may not have sufficient predictive power for cancer prognosis. The development of ...
Shuangge Ma, Mingyu Shi, Yang Li, Danhui Yi, Ben-C...