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ICALP
2001
Springer
14 years 1 days ago
Permutation Editing and Matching via Embeddings
Abstract. If the genetic maps of two species are modelled as permutations of (homologous) genes, the number of chromosomal rearrangements in the form of deletions, block moves, inv...
Graham Cormode, S. Muthukrishnan, Süleyman Ce...
JPDC
2006
146views more  JPDC 2006»
13 years 7 months ago
A semi-static approach to mapping dynamic iterative tasks onto heterogeneous computing systems
Minimization of the execution time of an iterative application in a heterogeneous parallel computing environment requires an appropriate mapping scheme for matching and scheduling...
Yu-Kwong Kwok, Anthony A. Maciejewski, Howard Jay ...
DAMON
2006
Springer
13 years 11 months ago
Processing-in-memory technology for knowledge discovery algorithms
The goal of this work is to gain insight into whether processingin-memory (PIM) technology can be used to accelerate the performance of link discovery algorithms, which represent ...
Jafar Adibi, Tim Barrett, Spundun Bhatt, Hans Chal...
BIOINFORMATICS
2010
170views more  BIOINFORMATICS 2010»
13 years 7 months ago
Joint estimation of DNA copy number from multiple platforms
DNA copy number variants (CNV) are gains and losses of segments of chromosomes, and comprise an important class of genetic variation. Recently, various microarray hybridization ba...
Nancy R. Zhang, Yasin Senbabaoglu, Jun Z. Li
HPDC
2007
IEEE
14 years 1 months ago
A fast topology inference: a building block for network-aware parallel processing
Adapting to the network is the key to achieving high performance for communication-intensive applications, including scientific computing, data intensive computing, and multicast...
Tatsuya Shirai, Hideo Saito, Kenjiro Taura