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2005
ACM
14 years 1 months ago
Tera-Scalable Algorithms for Variable-Density Elliptic Hydrodynamics with Spectral Accuracy
We describe Miranda, a massively parallel spectral/compact solver for variabledensity incompressible flow, including viscosity and species diffusivity effects. Miranda utilizes...
Andrew W. Cook, William H. Cabot, Peter L. William...
BMCBI
2005
107views more  BMCBI 2005»
13 years 7 months ago
ProbeMaker: an extensible framework for design of sets of oligonucleotide probes
Background: Procedures for genetic analyses based on oligonucleotide probes are powerful tools that can allow highly parallel investigations of genetic material. Such procedures r...
Johan Stenberg, Mats Nilsson, Ulf Landegren
BMCBI
2010
134views more  BMCBI 2010»
13 years 8 months ago
R-Gada: a fast and flexible pipeline for copy number analysis in association studies
Background: Genome-wide association studies (GWAS) using Copy Number Variation (CNV) are becoming a central focus of genetic research. CNVs have successfully provided target genom...
Roger Pique-Regi, Alejandro Cáceres, Juan R...
GECCO
2010
Springer
191views Optimization» more  GECCO 2010»
14 years 18 days ago
Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of sma
Recent advances in genotyping technology have led to the generation of an enormous quantity of genetic data. Traditional methods of statistical analysis have proved insufficient i...
Emily Rose Holzinger, Carrie C. Buchanan, Scott M....
ACRI
2006
Springer
14 years 1 months ago
Optimal 6-State Algorithms for the Behavior of Several Moving Creatures
The goal of our investigation is to find automatically the absolutely best rule for a moving creature in a cellular field. The task of the creature is to visit all empty cells wi...
Mathias Halbach, Rolf Hoffmann, Lars Both