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COCOON
2010
Springer
13 years 11 months ago
A Three-String Approach to the Closest String Problem
Given a set of n strings of length L and a radius d, the closest string problem (CSP for short) asks for a string tsol that is within a Hamming distance of d to each of the given ...
Zhi-Zhong Chen, Bin Ma, Lusheng Wang
STOC
2000
ACM
156views Algorithms» more  STOC 2000»
13 years 12 months ago
Near optimal multiple alignment within a band in polynomial time
Multiple sequence alignment is a fundamental problem in computational biology. Because of its notorious difficulties, aligning sequences within a constant band (c-diagonal) is a ...
Ming Li, Bin Ma, Lusheng Wang
ICALP
2001
Springer
14 years 19 hour ago
Approximation Algorithms for Partial Covering Problems
We study the generalization of covering problems to partial covering. Here we wish to cover only a desired number of elements, rather than covering all elements as in standard cov...
Rajiv Gandhi, Samir Khuller, Aravind Srinivasan
RTAS
2006
IEEE
14 years 1 months ago
Task Partitioning with Replication upon Heterogeneous Multiprocessor Systems
The heterogeneous multiprocessor task partitioning with replication problem involves determining a mapping of recurring tasks upon a set consisting of different processing units i...
Sathish Gopalakrishnan, Marco Caccamo
COMPSAC
2004
IEEE
13 years 11 months ago
On the Complexity of Finding Emerging Patterns
Emerging patterns have been studied as a useful type of pattern for the diagnosis and understanding of diseases based on the analysis of gene expression profiles. They are useful ...
Lusheng Wang, Hao Zhao, Guozhu Dong, Jianping Li